APOE

apolipoprotein E

Gene Information

Gene Symbol
APOE
Aliases
AD2
HGNC ID
HGNC:613
NCBI Gene ID
348
Ensembl Gene ID
ENSG00000130203
Gene Type
protein coding

Genomic Location

Chromosome
19
Assembly
GRCh38
Start Position
44,903,787
End Position
44,909,396
Number of Exons
4
Gene Length
5,610 bp

Overview

APOE is involved in lipid metabolism. Mice without APOE show dysregulations in lipid metabolism, having higher plasma cholesterol levels and developing arterial lesions, displaying DNA oxidative stress at a hepatic level, and presenting severe atherosclerosis and cutaneous xanthomatosis. They also have a significantly shorter lifespan than wild-type. Neurodegeneration has also been reported in APOE-null mice. Several polymorphisms in the human APOE gene have been associated with diseases, such as increased risk of myocardial infarction and Alzheimer’s disease. Polymorphisms in APOE have been linked to human longevity. There are four isoforms of APOE in humans. In Alzheimer’s disease the ApoE2 isoform is protective and the ApoE4 isoform is causative and stimulates amyloid beta production. ApoE4 also exacerbates tauopathy in mouse models of Alzheimer’s disease and ApoE4 knock-in mice show significantly higher levels of tau in the brain. Despite its association with age-related disease the ApoE4 isoform is the second most common after the ApoE3 isoform and is the ancestral form of APOE. Clearly, APOE has an impact on various age-related diseases, such as atherosclerosis and neurodegeneration, but its overall impact on the human ageing process remains to be determined.

Research Papers

20 papers in databaseSearch for More Papers
#1
Score:
80%

APOE modulates microglial immunometabolism in response to age, amyloid pathology, and inflammatory challenge.

Cell Rep
2023
PMID: 36871219

Modification Effects

APOE4 allele; increased Hif1alpha expression, disrupted tricarboxylic acid (TCA) cycle, pro-glycolytic shift in microglia

#2
Score:
80%

Alzheimer's disease-linked risk alleles elevate microglial cGAS-associated senescence and neurodegeneration in a tauopathy model.

Neuron
2024
PMID: 39353433

Modification Effects

APOE4 allele and TREM2 R47H variant; enhanced cGAS-STING signaling and microglial senescence

Longevity Association

Worsened tau pathology and neurodegeneration in female P301S tauopathy mice; mechanism: cGAS-STING signaling and microglial senescence

#3
Score:
80%

Genetic associations for two biological age measures point to distinct aging phenotypes.

Aging Cell
2021
PMID: 34038024

Modification Effects

APOE e2 and e4 variants; altered lipid binding properties and immune response

Longevity Association

Distinct aging phenotypes associated with APOE variants; genetic predisposition to heterogeneous aging patterns in humans

#4
Score:
80%

A meta-analysis of genome-wide association studies identifies multiple longevity genes.

Nat Commun
2019
PMID: 31413261

Longevity Association

ApoE epsilon4 (rs429358) associated with lower odds of survival; ApoE epsilon2 (rs7412) associated with higher odds of survival; rs7676745 near GPR78 associated with lower odds of survival to 90th percentile age in humans

#5
Score:
80%

Microglial apolipoprotein E particles contribute to neuronal senescence and synaptotoxicity.

iScience
2024
PMID: 38868202

Modification Effects

Microglial apoE particles impair neurite growth and synapses, promote neuronal senescence; APOE4 variant more neurotoxic than APOE3

#6
Score:
80%

Rare genetic associations with human lifespan in UK Biobank are enriched for oncogenic genes.

Nat Commun
2025
PMID: 40021682

Modification Effects

Loss-of-function variants in TET2, ATM, BRCA2, CKMT1B, BRCA1, ASXL1; pathogenic missense variants in DNMT3A, SF3B1, TET2, PTEN, SOX21, TP53, SRSF2, RLIM; altered oncogenic pathways

Longevity Association

Reduced lifespan in humans; mechanism: increased susceptibility to cancer, particularly through oncogenic pathways and clonal hematopoiesis

#7
Score:
80%

Impact of APOE epsilon4 and epsilon2 on plasma neurofilament light chain and cognition in autosomal dominant Alzheimer's disease.

Alzheimers Res Ther
2024
PMID: 39354618

Modification Effects

APOE epsilon4 and epsilon2 variants; altered plasma neurofilament light chain (NfL) concentrations and cognitive decline

#8
Score:
80%

Impact of APOE, Klotho, and sex on cognitive decline with aging.

Proc Natl Acad Sci U S A
2025
PMID: 39903109

Modification Effects

APOE epsilon4 allele; increased cognitive decline with aging, altered brain volume (smaller hippocampi and amygdala)

Longevity Association

Greater decline in cognition with aging in APOE epsilon4 carriers; sex-dependent effects, with younger female epsilon4 carriers showing initial cognitive advantage

#9
Score:
80%

APOE loss-of-function variants: Compatible with longevity and associated with resistance to Alzheimer's disease pathology.

Neuron
2024
PMID: 38301647

Modification Effects

APOE epsilon4 loss-of-function variants; potential reduction in abnormal function leading to AD

Longevity Association

Association with longevity and resistance to Alzheimer's disease pathology in humans; carriers showed no or delayed AD onset

#10
Score:
80%

ApoE e2 and aging-related outcomes in 379,000 UK Biobank participants.

Aging (Albany NY)
2020
PMID: 32511104

Modification Effects

APOE e2 variant; altered lipid binding properties, reduced total and LDL-cholesterol levels

Longevity Association

Protective effects on health outcomes, including lower risks of CAD and hypertension; minimal effects on frailty and muscle mass in UK Biobank participants

#11
Score:
80%

Associations between age, sex, APOE genotype, and regional vascular physiology in typically aging adults.

Neuroimage
2023
PMID: 37187365

Longevity Association

APOEepsilon4 allele associated with stronger decline in cerebral blood flow and increase in arterial transit time with age in females; modulates age-associated cerebral perfusion patterns

#12
Score:
80%

Influence of APOE genotype in primary age-related tauopathy.

Acta Neuropathol Commun
2020
PMID: 33287896

Modification Effects

APOE epsilon2 and epsilon4 variants; differing binding properties to Abeta

Longevity Association

Decreased cognitive impairment with APOE epsilon2; potential protective effect in primary age-related tauopathy

#13
Score:
80%

Effects of obesogenic diet and 17beta-estradiol in female mice with APOE 3/3, 3/4, and 4/4 genotypes.

Front Aging Neurosci
2024
PMID: 39347015

Modification Effects

APOE genotype variations (APOE3/3, APOE3/4, APOE4/4); altered metabolic and cognitive functions

Longevity Association

Estradiol treatment improves metabolic and cognitive outcomes in female mice with APOE4 genotype; obesity exacerbates cognitive decline, especially in APOE3/3 mice

#14
Score:
80%

Investigation of the 5q33.3 longevity locus and age-related phenotypes.

Aging (Albany NY)
2017
PMID: 28100865

Longevity Association

Association with survival to >= 90 years, lower all-cause mortality, and decreased risk of heart attack, heart failure, and hypertension; improved physical functioning in long-lived individuals; human longevity locus

#15
Score:
80%

Polyunsaturated Fatty Acid - mediated Cellular Rejuvenation for Reversing Age-related Vision Decline.

bioRxiv
2024
PMID: 39005302

Modification Effects

ELOVL2 enzymatic activity impairment (Elovl2 C234W mutation); altered VLC-PUFA production, particularly 24:5n-3

Longevity Association

Improved visual function in aged mice; reduced sub-RPE deposits and aging-related gene expression; potential therapeutic target for preventing age-related vision loss, associated with delayed onset of intermediate AMD in humans

#16
Score:
80%

APOE varepsilon4 allele and TOMM40-APOC1 variants jointly contribute to survival to older ages.

Aging Cell
2022
PMID: 36330582

Modification Effects

APOE varepsilon4 allele and TOMM40-APOC1 variants; altered lipid- and immunity-related mechanisms

Longevity Association

Reduced survival to older ages (85+ years) in human carriers of APOE varepsilon4 allele with minor alleles of TOMM40 and/or APOC1 polymorphisms; mechanism: lipid- and immunity-related

#17
Score:
80%

TOMM40-APOE chimera linking Alzheimer's highest risk genes: a new pathway for mitochondria regulation and APOE4 pathogenesis.

bioRxiv
2024
PMID: 39416128

Modification Effects

TOMM40-APOE chimera (T9A2) generation; altered mitochondrial targeting and bioenergetic capacity

Longevity Association

Decreased oxidative stress; impaired in APOE4 genotypes, potential link to neurodegeneration and aging-related cognitive decline

#18
Score:
80%

APOE, TOMM40, and sex interactions on neural network connectivity.

Neurobiol Aging
2022
PMID: 34740077

Modification Effects

APOE epsilon4 haplotype; altered neural network connectivity, TOMM40 rs2075650 G/A carriage; affected neural and cognitive outcomes

#19
Score:
80%

Sex and APOE epsilon4 allele differences in longitudinal white matter microstructure in multiple cohorts of aging and Alzheimer's disease.

Alzheimers Dement
2025
PMID: 39711105

Modification Effects

APOE epsilon4 allele; altered white matter microstructure, particularly in limbic and occipital transcallosal tracts

#20
Score:
80%

Alzheimer's disease-linked risk alleles elevate microglial cGAS-associated senescence and neurodegeneration in a tauopathy model.

bioRxiv
2024
PMID: 38328219

Modification Effects

APOE4 allele and TREM2 R47H variant; enhanced cGAS-STING signaling and type-I interferon response, increased microglial senescence